No. You cannot change package structure at run-time. You can dynamically read information in at run-time, so you can change your connection string for example. The best method is the build in Configuration support. You can also drive most properties through Expressions and supply a variable to set the property. Variables can be set in several ways, including other expressions and script tasks.
To load data from multiple sources, try using the For Each Loop, and drive this off your list of "connections". This can contain a data flow task, the connection of which can be updated on each loop iteration.
Try this article to give you an idea of looping with recordsets.
Shredding a Recordset
(http://www.sqlis.com/default.aspx?59)
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